[23] | 1 | #!/usr/bin/env python |
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[225] | 2 | # |
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| 3 | # This file is part of Jobmonarch |
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| 4 | # |
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[363] | 5 | # Copyright (C) 2006-2007 Ramon Bastiaans |
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[225] | 6 | # |
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| 7 | # Jobmonarch is free software; you can redistribute it and/or modify |
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| 8 | # it under the terms of the GNU General Public License as published by |
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| 9 | # the Free Software Foundation; either version 2 of the License, or |
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| 10 | # (at your option) any later version. |
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| 11 | # |
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| 12 | # Jobmonarch is distributed in the hope that it will be useful, |
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| 13 | # but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 14 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 15 | # GNU General Public License for more details. |
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| 16 | # |
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| 17 | # You should have received a copy of the GNU General Public License |
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| 18 | # along with this program; if not, write to the Free Software |
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| 19 | # Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA |
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| 20 | # |
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[228] | 21 | # SVN $Id: jobmond.py 373 2007-06-13 13:38:52Z bastiaans $ |
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[227] | 22 | # |
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[23] | 23 | |
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[212] | 24 | import sys, getopt, ConfigParser |
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[354] | 25 | import time, os, socket, string, re |
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[373] | 26 | import xdrlib, socket, syslog |
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[318] | 27 | import xml, xml.sax |
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| 28 | from xml.sax import saxutils, make_parser |
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| 29 | from xml.sax import make_parser |
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| 30 | from xml.sax.handler import feature_namespaces |
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| 31 | |
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[307] | 32 | def usage(): |
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| 33 | |
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| 34 | print |
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| 35 | print 'usage: jobmond [options]' |
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| 36 | print 'options:' |
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| 37 | print ' --config, -c configuration file' |
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| 38 | print ' --pidfile, -p pid file' |
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| 39 | print ' --help, -h help' |
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| 40 | print |
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| 41 | |
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[212] | 42 | def processArgs( args ): |
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[26] | 43 | |
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[354] | 44 | SHORT_L = 'hc:' |
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| 45 | LONG_L = [ 'help', 'config=' ] |
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[165] | 46 | |
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[307] | 47 | global PIDFILE |
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[354] | 48 | PIDFILE = None |
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[61] | 49 | |
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[354] | 50 | config_filename = '/etc/jobmond.conf' |
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| 51 | |
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[212] | 52 | try: |
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[68] | 53 | |
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[354] | 54 | opts, args = getopt.getopt( args, SHORT_L, LONG_L ) |
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[185] | 55 | |
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[307] | 56 | except getopt.GetoptError, detail: |
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[212] | 57 | |
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| 58 | print detail |
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[307] | 59 | usage() |
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[354] | 60 | sys.exit( 1 ) |
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[212] | 61 | |
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| 62 | for opt, value in opts: |
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| 63 | |
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| 64 | if opt in [ '--config', '-c' ]: |
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| 65 | |
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[354] | 66 | config_filename = value |
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[212] | 67 | |
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[307] | 68 | if opt in [ '--pidfile', '-p' ]: |
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[212] | 69 | |
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[354] | 70 | PIDFILE = value |
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[307] | 71 | |
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| 72 | if opt in [ '--help', '-h' ]: |
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| 73 | |
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| 74 | usage() |
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[354] | 75 | sys.exit( 0 ) |
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[212] | 76 | |
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| 77 | return loadConfig( config_filename ) |
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| 78 | |
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| 79 | def loadConfig( filename ): |
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| 80 | |
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[215] | 81 | def getlist( cfg_string ): |
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| 82 | |
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| 83 | my_list = [ ] |
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| 84 | |
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| 85 | for item_txt in cfg_string.split( ',' ): |
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| 86 | |
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| 87 | sep_char = None |
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| 88 | |
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| 89 | item_txt = item_txt.strip() |
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| 90 | |
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| 91 | for s_char in [ "'", '"' ]: |
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| 92 | |
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| 93 | if item_txt.find( s_char ) != -1: |
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| 94 | |
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| 95 | if item_txt.count( s_char ) != 2: |
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| 96 | |
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| 97 | print 'Missing quote: %s' %item_txt |
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| 98 | sys.exit( 1 ) |
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| 99 | |
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| 100 | else: |
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| 101 | |
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| 102 | sep_char = s_char |
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| 103 | break |
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| 104 | |
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| 105 | if sep_char: |
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| 106 | |
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| 107 | item_txt = item_txt.split( sep_char )[1] |
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| 108 | |
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| 109 | my_list.append( item_txt ) |
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| 110 | |
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| 111 | return my_list |
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| 112 | |
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[354] | 113 | cfg = ConfigParser.ConfigParser() |
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[212] | 114 | |
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| 115 | cfg.read( filename ) |
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| 116 | |
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[354] | 117 | global DEBUG_LEVEL, DAEMONIZE, BATCH_SERVER, BATCH_POLL_INTERVAL |
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| 118 | global GMOND_CONF, DETECT_TIME_DIFFS, BATCH_HOST_TRANSLATE |
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[373] | 119 | global BATCH_API, QUEUE, GMETRIC_TARGET, USE_SYSLOG |
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| 120 | global SYSLOG_LEVEL, SYSLOG_FACILITY |
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[212] | 121 | |
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[354] | 122 | DEBUG_LEVEL = cfg.getint( 'DEFAULT', 'DEBUG_LEVEL' ) |
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[212] | 123 | |
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[354] | 124 | DAEMONIZE = cfg.getboolean( 'DEFAULT', 'DAEMONIZE' ) |
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[212] | 125 | |
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[265] | 126 | try: |
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[373] | 127 | USE_SYSLOG = cfg.getboolean( 'DEFAULT', 'USE_SYSLOG' ) |
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[212] | 128 | |
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[373] | 129 | except ConfigParser.NoOptionError: |
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| 130 | |
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| 131 | USE_SYSLOG = True |
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| 132 | |
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| 133 | debug_msg( 0, 'ERROR: no option USE_SYSLOG found: assuming yes' ) |
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| 134 | |
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| 135 | if USE_SYSLOG: |
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| 136 | |
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| 137 | try: |
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| 138 | SYSLOG_LEVEL = cfg.getint( 'DEFAULT', 'SYSLOG_LEVEL' ) |
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| 139 | |
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| 140 | except ConfigParser.NoOptionError: |
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| 141 | |
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| 142 | debug_msg( 0, 'ERROR: no option SYSLOG_LEVEL found: assuming level 0' ) |
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| 143 | SYSLOG_LEVEL = 0 |
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| 144 | |
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| 145 | try: |
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| 146 | |
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| 147 | SYSLOG_FACILITY = eval( 'syslog.LOG_' + cfg.get( 'DEFAULT', 'SYSLOG_FACILITY' ) ) |
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| 148 | |
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| 149 | except AttributeError, detail: |
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| 150 | |
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| 151 | SYSLOG_FACILITY = syslog.LOG_DAEMON |
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| 152 | |
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| 153 | debug_msg( 0, 'ERROR: no option SYSLOG_FACILITY found: assuming facility DAEMON' ) |
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| 154 | |
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| 155 | try: |
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| 156 | |
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[354] | 157 | BATCH_SERVER = cfg.get( 'DEFAULT', 'BATCH_SERVER' ) |
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[212] | 158 | |
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[265] | 159 | except ConfigParser.NoOptionError: |
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| 160 | |
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| 161 | # Backwards compatibility for old configs |
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| 162 | # |
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| 163 | |
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[354] | 164 | BATCH_SERVER = cfg.get( 'DEFAULT', 'TORQUE_SERVER' ) |
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| 165 | api_guess = 'pbs' |
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[265] | 166 | |
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| 167 | try: |
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| 168 | |
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[354] | 169 | BATCH_POLL_INTERVAL = cfg.getint( 'DEFAULT', 'BATCH_POLL_INTERVAL' ) |
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[265] | 170 | |
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| 171 | except ConfigParser.NoOptionError: |
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| 172 | |
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| 173 | # Backwards compatibility for old configs |
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| 174 | # |
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| 175 | |
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[354] | 176 | BATCH_POLL_INTERVAL = cfg.getint( 'DEFAULT', 'TORQUE_POLL_INTERVAL' ) |
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| 177 | api_guess = 'pbs' |
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[353] | 178 | |
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| 179 | try: |
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[212] | 180 | |
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[354] | 181 | GMOND_CONF = cfg.get( 'DEFAULT', 'GMOND_CONF' ) |
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[353] | 182 | |
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| 183 | except ConfigParser.NoOptionError: |
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| 184 | |
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[354] | 185 | GMOND_CONF = None |
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[353] | 186 | |
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[354] | 187 | DETECT_TIME_DIFFS = cfg.getboolean( 'DEFAULT', 'DETECT_TIME_DIFFS' ) |
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[212] | 188 | |
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[354] | 189 | BATCH_HOST_TRANSLATE = getlist( cfg.get( 'DEFAULT', 'BATCH_HOST_TRANSLATE' ) ) |
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[215] | 190 | |
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[266] | 191 | try: |
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[256] | 192 | |
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[354] | 193 | BATCH_API = cfg.get( 'DEFAULT', 'BATCH_API' ) |
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[266] | 194 | |
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| 195 | except ConfigParser.NoOptionError, detail: |
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| 196 | |
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| 197 | if BATCH_SERVER and api_guess: |
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[354] | 198 | |
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| 199 | BATCH_API = api_guess |
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[266] | 200 | else: |
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[373] | 201 | debug_msg( 0, "FATAL ERROR: BATCH_API not set and can't make guess" ) |
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[266] | 202 | sys.exit( 1 ) |
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[317] | 203 | |
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| 204 | try: |
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| 205 | |
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[354] | 206 | QUEUE = getlist( cfg.get( 'DEFAULT', 'QUEUE' ) ) |
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[317] | 207 | |
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| 208 | except ConfigParser.NoOptionError, detail: |
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| 209 | |
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[354] | 210 | QUEUE = None |
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[353] | 211 | |
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| 212 | try: |
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| 213 | |
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[354] | 214 | GMETRIC_TARGET = cfg.get( 'DEFAULT', 'GMETRIC_TARGET' ) |
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[353] | 215 | |
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| 216 | except ConfigParser.NoOptionError: |
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| 217 | |
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[354] | 218 | GMETRIC_TARGET = None |
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[353] | 219 | |
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| 220 | if not GMOND_CONF: |
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| 221 | |
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[373] | 222 | debug_msg( 0, "FATAL ERROR: GMETRIC_TARGET and GMOND_CONF both not set! Set at least one!" ) |
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[353] | 223 | sys.exit( 1 ) |
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| 224 | else: |
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| 225 | |
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[373] | 226 | debug_msg( 0, "ERROR: GMETRIC_TARGET not set: internel Gmetric handling aborted. Failing back to DEPRECATED use of gmond.conf/gmetric binary. This will slow down jobmond significantly!" ) |
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[353] | 227 | |
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[212] | 228 | return True |
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| 229 | |
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[253] | 230 | METRIC_MAX_VAL_LEN = 900 |
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| 231 | |
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[61] | 232 | class DataProcessor: |
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[355] | 233 | |
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[68] | 234 | """Class for processing of data""" |
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[61] | 235 | |
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| 236 | binary = '/usr/bin/gmetric' |
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| 237 | |
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| 238 | def __init__( self, binary=None ): |
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[355] | 239 | |
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[68] | 240 | """Remember alternate binary location if supplied""" |
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[61] | 241 | |
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| 242 | if binary: |
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| 243 | self.binary = binary |
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| 244 | |
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[80] | 245 | # Timeout for XML |
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| 246 | # |
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| 247 | # From ganglia's documentation: |
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| 248 | # |
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| 249 | # 'A metric will be deleted DMAX seconds after it is received, and |
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| 250 | # DMAX=0 means eternal life.' |
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[61] | 251 | |
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[256] | 252 | self.dmax = str( int( int( BATCH_POLL_INTERVAL ) * 2 ) ) |
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[80] | 253 | |
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[353] | 254 | if GMOND_CONF: |
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[354] | 255 | |
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[353] | 256 | try: |
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| 257 | gmond_file = GMOND_CONF |
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[68] | 258 | |
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[353] | 259 | except NameError: |
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| 260 | gmond_file = '/etc/gmond.conf' |
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[68] | 261 | |
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[353] | 262 | if not os.path.exists( gmond_file ): |
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[373] | 263 | debug_msg( 0, 'FATAL ERROR: ' + gmond_file + ' does not exist' ) |
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[353] | 264 | sys.exit( 1 ) |
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[68] | 265 | |
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[353] | 266 | incompatible = self.checkGmetricVersion() |
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[61] | 267 | |
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[353] | 268 | if incompatible: |
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[355] | 269 | |
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| 270 | debug_msg( 0, 'Gmetric version not compatible, please upgrade to at least 3.0.1' ) |
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[353] | 271 | sys.exit( 1 ) |
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[65] | 272 | |
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| 273 | def checkGmetricVersion( self ): |
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[355] | 274 | |
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[68] | 275 | """ |
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| 276 | Check version of gmetric is at least 3.0.1 |
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| 277 | for the syntax we use |
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| 278 | """ |
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[65] | 279 | |
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[255] | 280 | global METRIC_MAX_VAL_LEN |
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| 281 | |
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[341] | 282 | incompatible = 0 |
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| 283 | |
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[355] | 284 | gfp = os.popen( self.binary + ' --version' ) |
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| 285 | lines = gfp.readlines() |
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[65] | 286 | |
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[355] | 287 | gfp.close() |
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| 288 | |
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| 289 | for line in lines: |
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| 290 | |
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[65] | 291 | line = line.split( ' ' ) |
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| 292 | |
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[355] | 293 | if len( line ) == 2 and str( line ).find( 'gmetric' ) != -1: |
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[65] | 294 | |
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[355] | 295 | gmetric_version = line[1].split( '\n' )[0] |
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[65] | 296 | |
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[355] | 297 | version_major = int( gmetric_version.split( '.' )[0] ) |
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| 298 | version_minor = int( gmetric_version.split( '.' )[1] ) |
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| 299 | version_patch = int( gmetric_version.split( '.' )[2] ) |
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[65] | 300 | |
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[355] | 301 | incompatible = 0 |
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[65] | 302 | |
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| 303 | if version_major < 3: |
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| 304 | |
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| 305 | incompatible = 1 |
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| 306 | |
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| 307 | elif version_major == 3: |
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| 308 | |
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| 309 | if version_minor == 0: |
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| 310 | |
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| 311 | if version_patch < 1: |
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| 312 | |
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[91] | 313 | incompatible = 1 |
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[65] | 314 | |
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[255] | 315 | if version_patch < 3: |
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| 316 | |
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| 317 | METRIC_MAX_VAL_LEN = 900 |
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| 318 | |
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| 319 | elif version_patch >= 3: |
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| 320 | |
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| 321 | METRIC_MAX_VAL_LEN = 1400 |
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| 322 | |
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[65] | 323 | return incompatible |
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| 324 | |
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[75] | 325 | def multicastGmetric( self, metricname, metricval, valtype='string' ): |
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[355] | 326 | |
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[68] | 327 | """Call gmetric binary and multicast""" |
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[65] | 328 | |
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| 329 | cmd = self.binary |
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| 330 | |
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[353] | 331 | if GMETRIC_TARGET: |
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[61] | 332 | |
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[353] | 333 | from gmetric import Gmetric |
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[61] | 334 | |
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[353] | 335 | if GMETRIC_TARGET: |
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[61] | 336 | |
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[353] | 337 | GMETRIC_TARGET_HOST = GMETRIC_TARGET.split( ':' )[0] |
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| 338 | GMETRIC_TARGET_PORT = GMETRIC_TARGET.split( ':' )[1] |
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| 339 | |
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| 340 | metric_debug = "[gmetric] name: %s - val: %s - dmax: %s" %( str( metricname ), str( metricval ), str( self.dmax ) ) |
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| 341 | |
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| 342 | debug_msg( 10, printTime() + ' ' + metric_debug) |
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| 343 | |
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| 344 | gm = Gmetric( GMETRIC_TARGET_HOST, GMETRIC_TARGET_PORT ) |
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| 345 | |
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| 346 | gm.send( str( metricname ), str( metricval ), str( self.dmax ) ) |
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| 347 | |
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| 348 | else: |
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| 349 | try: |
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| 350 | cmd = cmd + ' -c' + GMOND_CONF |
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| 351 | |
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| 352 | except NameError: |
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| 353 | |
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| 354 | debug_msg( 10, 'Assuming /etc/gmond.conf for gmetric cmd (ommitting)' ) |
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| 355 | |
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| 356 | cmd = cmd + ' -n' + str( metricname )+ ' -v"' + str( metricval )+ '" -t' + str( valtype ) + ' -d' + str( self.dmax ) |
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| 357 | |
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| 358 | debug_msg( 10, printTime() + ' ' + cmd ) |
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| 359 | |
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| 360 | os.system( cmd ) |
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| 361 | |
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[318] | 362 | class DataGatherer: |
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[23] | 363 | |
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[318] | 364 | """Skeleton class for batch system DataGatherer""" |
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[256] | 365 | |
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[318] | 366 | def printJobs( self, jobs ): |
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[355] | 367 | |
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[318] | 368 | """Print a jobinfo overview""" |
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| 369 | |
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| 370 | for name, attrs in self.jobs.items(): |
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| 371 | |
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| 372 | print 'job %s' %(name) |
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| 373 | |
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| 374 | for name, val in attrs.items(): |
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| 375 | |
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| 376 | print '\t%s = %s' %( name, val ) |
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| 377 | |
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| 378 | def printJob( self, jobs, job_id ): |
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[355] | 379 | |
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[318] | 380 | """Print job with job_id from jobs""" |
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| 381 | |
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| 382 | print 'job %s' %(job_id) |
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| 383 | |
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| 384 | for name, val in jobs[ job_id ].items(): |
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| 385 | |
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| 386 | print '\t%s = %s' %( name, val ) |
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| 387 | |
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[256] | 388 | def daemon( self ): |
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[355] | 389 | |
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[318] | 390 | """Run as daemon forever""" |
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[256] | 391 | |
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[318] | 392 | # Fork the first child |
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| 393 | # |
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| 394 | pid = os.fork() |
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| 395 | if pid > 0: |
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| 396 | sys.exit(0) # end parent |
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[256] | 397 | |
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[318] | 398 | # creates a session and sets the process group ID |
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| 399 | # |
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| 400 | os.setsid() |
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| 401 | |
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| 402 | # Fork the second child |
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| 403 | # |
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| 404 | pid = os.fork() |
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| 405 | if pid > 0: |
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| 406 | sys.exit(0) # end parent |
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| 407 | |
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| 408 | write_pidfile() |
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| 409 | |
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| 410 | # Go to the root directory and set the umask |
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| 411 | # |
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| 412 | os.chdir('/') |
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| 413 | os.umask(0) |
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| 414 | |
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| 415 | sys.stdin.close() |
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| 416 | sys.stdout.close() |
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| 417 | sys.stderr.close() |
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| 418 | |
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| 419 | os.open('/dev/null', os.O_RDWR) |
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| 420 | os.dup2(0, 1) |
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| 421 | os.dup2(0, 2) |
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| 422 | |
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| 423 | self.run() |
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| 424 | |
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[256] | 425 | def run( self ): |
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[355] | 426 | |
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[318] | 427 | """Main thread""" |
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[256] | 428 | |
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[318] | 429 | while ( 1 ): |
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| 430 | |
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[348] | 431 | self.getJobData() |
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| 432 | self.submitJobData() |
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[318] | 433 | time.sleep( BATCH_POLL_INTERVAL ) |
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[256] | 434 | |
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[318] | 435 | class SgeQstatXMLParser(xml.sax.handler.ContentHandler): |
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[256] | 436 | |
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[318] | 437 | """Babu Sundaram's experimental SGE qstat XML parser""" |
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[256] | 438 | |
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[318] | 439 | def __init__(self, qstatinxml): |
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| 440 | |
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| 441 | self.qstatfile = qstatinxml |
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| 442 | self.attribs = {} |
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| 443 | self.value = '' |
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| 444 | self.jobID = '' |
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| 445 | self.currentJobInfo = '' |
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| 446 | self.job_list = [] |
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| 447 | self.EOFFlag = 0 |
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| 448 | self.jobinfoCount = 0 |
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| 449 | |
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| 450 | |
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| 451 | def startElement(self, name, attrs): |
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| 452 | |
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| 453 | if name == 'job_list': |
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| 454 | self.currentJobInfo = 'Status=' + attrs.get('state', None) + ' ' |
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| 455 | elif name == 'job_info': |
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| 456 | self.job_list = [] |
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| 457 | self.jobinfoCount += 1 |
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| 458 | |
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| 459 | def characters(self, ch): |
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| 460 | |
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| 461 | self.value = self.value + ch |
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| 462 | |
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| 463 | def endElement(self, name): |
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| 464 | |
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| 465 | if len(self.value.strip()) > 0 : |
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| 466 | |
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| 467 | self.currentJobInfo += name + '=' + self.value.strip() + ' ' |
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| 468 | elif name != 'job_list': |
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| 469 | |
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| 470 | self.currentJobInfo += name + '=Unknown ' |
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| 471 | |
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| 472 | if name == 'JB_job_number': |
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| 473 | |
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| 474 | self.jobID = self.value.strip() |
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| 475 | self.job_list.append(self.jobID) |
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| 476 | |
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| 477 | if name == 'job_list': |
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| 478 | |
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| 479 | if self.attribs.has_key(self.jobID) == False: |
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| 480 | self.attribs[self.jobID] = self.currentJobInfo |
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| 481 | elif self.attribs.has_key(self.jobID) and self.attribs[self.jobID] != self.currentJobInfo: |
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| 482 | self.attribs[self.jobID] = self.currentJobInfo |
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| 483 | self.currentJobInfo = '' |
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| 484 | self.jobID = '' |
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| 485 | |
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| 486 | elif name == 'job_info' and self.jobinfoCount == 2: |
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| 487 | |
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| 488 | deljobs = [] |
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| 489 | for id in self.attribs: |
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| 490 | try: |
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| 491 | self.job_list.index(str(id)) |
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| 492 | except ValueError: |
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| 493 | deljobs.append(id) |
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| 494 | for i in deljobs: |
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| 495 | del self.attribs[i] |
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| 496 | deljobs = [] |
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| 497 | self.jobinfoCount = 0 |
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| 498 | |
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| 499 | self.value = '' |
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| 500 | |
---|
| 501 | class SgeDataGatherer(DataGatherer): |
---|
| 502 | |
---|
[61] | 503 | jobs = { } |
---|
[347] | 504 | SGE_QSTAT_XML_FILE = '/tmp/.jobmonarch.sge.qstat' |
---|
[61] | 505 | |
---|
[318] | 506 | def __init__( self ): |
---|
| 507 | """Setup appropriate variables""" |
---|
| 508 | |
---|
| 509 | self.jobs = { } |
---|
| 510 | self.timeoffset = 0 |
---|
| 511 | self.dp = DataProcessor() |
---|
| 512 | self.initSgeJobInfo() |
---|
| 513 | |
---|
| 514 | def initSgeJobInfo( self ): |
---|
| 515 | """This is outside the scope of DRMAA; Get the current jobs in SGE""" |
---|
| 516 | """This is a hack because we cant get info about jobs beyond""" |
---|
| 517 | """those in the current DRMAA session""" |
---|
| 518 | |
---|
[347] | 519 | self.qstatparser = SgeQstatXMLParser( self.SGE_QSTAT_XML_FILE ) |
---|
[318] | 520 | |
---|
| 521 | # Obtain the qstat information from SGE in XML format |
---|
| 522 | # This would change to DRMAA-specific calls from 6.0u9 |
---|
| 523 | |
---|
| 524 | def getJobData(self): |
---|
| 525 | """Gather all data on current jobs in SGE""" |
---|
| 526 | |
---|
| 527 | # Get the information about the current jobs in the SGE queue |
---|
| 528 | info = os.popen("qstat -ext -xml").readlines() |
---|
[347] | 529 | f = open(self.SGE_QSTAT_XML_FILE,'w') |
---|
[318] | 530 | for lines in info: |
---|
| 531 | f.write(lines) |
---|
| 532 | f.close() |
---|
| 533 | |
---|
| 534 | # Parse the input |
---|
| 535 | f = open(self.qstatparser.qstatfile, 'r') |
---|
| 536 | xml.sax.parse(f, self.qstatparser) |
---|
| 537 | f.close() |
---|
| 538 | |
---|
| 539 | self.cur_time = time.time() |
---|
| 540 | |
---|
| 541 | return self.qstatparser.attribs |
---|
| 542 | |
---|
| 543 | def submitJobData(self): |
---|
| 544 | """Submit job info list""" |
---|
| 545 | |
---|
| 546 | self.dp.multicastGmetric( 'MONARCH-HEARTBEAT', str( int( int( self.cur_time ) + int( self.timeoffset ) ) ) ) |
---|
| 547 | # Now let's spread the knowledge |
---|
| 548 | # |
---|
| 549 | metric_increment = 0 |
---|
| 550 | for jobid, jobattrs in self.qstatparser.attribs.items(): |
---|
| 551 | |
---|
| 552 | self.dp.multicastGmetric( 'MONARCH-JOB-' + jobid + '-' + str(metric_increment), jobattrs) |
---|
| 553 | |
---|
[355] | 554 | class PbsDataGatherer( DataGatherer ): |
---|
[318] | 555 | |
---|
| 556 | """This is the DataGatherer for PBS and Torque""" |
---|
| 557 | |
---|
[256] | 558 | global PBSQuery |
---|
| 559 | |
---|
[23] | 560 | def __init__( self ): |
---|
[354] | 561 | |
---|
[68] | 562 | """Setup appropriate variables""" |
---|
[23] | 563 | |
---|
[354] | 564 | self.jobs = { } |
---|
| 565 | self.timeoffset = 0 |
---|
| 566 | self.dp = DataProcessor() |
---|
| 567 | |
---|
[91] | 568 | self.initPbsQuery() |
---|
[23] | 569 | |
---|
[91] | 570 | def initPbsQuery( self ): |
---|
| 571 | |
---|
[354] | 572 | self.pq = None |
---|
| 573 | |
---|
[256] | 574 | if( BATCH_SERVER ): |
---|
[354] | 575 | |
---|
| 576 | self.pq = PBSQuery( BATCH_SERVER ) |
---|
[174] | 577 | else: |
---|
[354] | 578 | self.pq = PBSQuery() |
---|
[91] | 579 | |
---|
[26] | 580 | def getAttr( self, attrs, name ): |
---|
[354] | 581 | |
---|
[68] | 582 | """Return certain attribute from dictionary, if exists""" |
---|
[26] | 583 | |
---|
| 584 | if attrs.has_key( name ): |
---|
[354] | 585 | |
---|
| 586 | return attrs[ name ] |
---|
[26] | 587 | else: |
---|
| 588 | return '' |
---|
| 589 | |
---|
| 590 | def jobDataChanged( self, jobs, job_id, attrs ): |
---|
[354] | 591 | |
---|
[68] | 592 | """Check if job with attrs and job_id in jobs has changed""" |
---|
[26] | 593 | |
---|
| 594 | if jobs.has_key( job_id ): |
---|
[354] | 595 | |
---|
[26] | 596 | oldData = jobs[ job_id ] |
---|
| 597 | else: |
---|
| 598 | return 1 |
---|
| 599 | |
---|
| 600 | for name, val in attrs.items(): |
---|
| 601 | |
---|
| 602 | if oldData.has_key( name ): |
---|
| 603 | |
---|
| 604 | if oldData[ name ] != attrs[ name ]: |
---|
| 605 | |
---|
| 606 | return 1 |
---|
| 607 | |
---|
| 608 | else: |
---|
| 609 | return 1 |
---|
| 610 | |
---|
| 611 | return 0 |
---|
| 612 | |
---|
[348] | 613 | def getJobData( self ): |
---|
[354] | 614 | |
---|
[68] | 615 | """Gather all data on current jobs in Torque""" |
---|
[26] | 616 | |
---|
[354] | 617 | joblist = {} |
---|
[359] | 618 | self.cur_time = 0 |
---|
[349] | 619 | |
---|
[359] | 620 | try: |
---|
| 621 | joblist = self.pq.getjobs() |
---|
| 622 | self.cur_time = time.time() |
---|
[354] | 623 | |
---|
[359] | 624 | except PBSError, detail: |
---|
[354] | 625 | |
---|
[359] | 626 | debug_msg( 10, "Caught PBS unavailable, skipping until next polling interval: " + str( detail ) ) |
---|
| 627 | return None |
---|
[354] | 628 | |
---|
| 629 | jobs_processed = [ ] |
---|
[26] | 630 | |
---|
| 631 | for name, attrs in joblist.items(): |
---|
| 632 | |
---|
[354] | 633 | job_id = name.split( '.' )[0] |
---|
[26] | 634 | |
---|
| 635 | jobs_processed.append( job_id ) |
---|
[61] | 636 | |
---|
[354] | 637 | name = self.getAttr( attrs, 'Job_Name' ) |
---|
| 638 | queue = self.getAttr( attrs, 'queue' ) |
---|
[317] | 639 | |
---|
| 640 | if QUEUE: |
---|
| 641 | |
---|
| 642 | if QUEUE != queue: |
---|
| 643 | |
---|
| 644 | continue |
---|
| 645 | |
---|
[354] | 646 | owner = self.getAttr( attrs, 'Job_Owner' ).split( '@' )[0] |
---|
| 647 | requested_time = self.getAttr( attrs, 'Resource_List.walltime' ) |
---|
| 648 | requested_memory = self.getAttr( attrs, 'Resource_List.mem' ) |
---|
[95] | 649 | |
---|
[354] | 650 | mynoderequest = self.getAttr( attrs, 'Resource_List.nodes' ) |
---|
[95] | 651 | |
---|
[354] | 652 | ppn = '' |
---|
[281] | 653 | |
---|
[26] | 654 | if mynoderequest.find( ':' ) != -1 and mynoderequest.find( 'ppn' ) != -1: |
---|
[95] | 655 | |
---|
[354] | 656 | mynoderequest_fields = mynoderequest.split( ':' ) |
---|
[281] | 657 | |
---|
| 658 | for mynoderequest_field in mynoderequest_fields: |
---|
| 659 | |
---|
| 660 | if mynoderequest_field.find( 'ppn' ) != -1: |
---|
| 661 | |
---|
[354] | 662 | ppn = mynoderequest_field.split( 'ppn=' )[1] |
---|
[281] | 663 | |
---|
[354] | 664 | status = self.getAttr( attrs, 'job_state' ) |
---|
[25] | 665 | |
---|
[354] | 666 | queued_timestamp = self.getAttr( attrs, 'ctime' ) |
---|
[243] | 667 | |
---|
[95] | 668 | if status == 'R': |
---|
[133] | 669 | |
---|
[354] | 670 | start_timestamp = self.getAttr( attrs, 'mtime' ) |
---|
| 671 | nodes = self.getAttr( attrs, 'exec_host' ).split( '+' ) |
---|
[133] | 672 | |
---|
[354] | 673 | nodeslist = [ ] |
---|
| 674 | |
---|
[133] | 675 | for node in nodes: |
---|
| 676 | |
---|
[354] | 677 | host = node.split( '/' )[0] |
---|
| 678 | |
---|
[133] | 679 | if nodeslist.count( host ) == 0: |
---|
[215] | 680 | |
---|
| 681 | for translate_pattern in BATCH_HOST_TRANSLATE: |
---|
| 682 | |
---|
[220] | 683 | if translate_pattern.find( '/' ) != -1: |
---|
[215] | 684 | |
---|
[354] | 685 | translate_orig = translate_pattern.split( '/' )[1] |
---|
| 686 | translate_new = translate_pattern.split( '/' )[2] |
---|
[220] | 687 | |
---|
[354] | 688 | host = re.sub( translate_orig, translate_new, host ) |
---|
[216] | 689 | |
---|
[217] | 690 | if not host in nodeslist: |
---|
[216] | 691 | |
---|
| 692 | nodeslist.append( host ) |
---|
[133] | 693 | |
---|
[185] | 694 | if DETECT_TIME_DIFFS: |
---|
| 695 | |
---|
| 696 | # If a job start if later than our current date, |
---|
| 697 | # that must mean the Torque server's time is later |
---|
| 698 | # than our local time. |
---|
| 699 | |
---|
[354] | 700 | if int( start_timestamp ) > int( int( self.cur_time ) + int( self.timeoffset ) ): |
---|
[185] | 701 | |
---|
[354] | 702 | self.timeoffset = int( int(start_timestamp) - int(self.cur_time) ) |
---|
[185] | 703 | |
---|
[133] | 704 | elif status == 'Q': |
---|
[95] | 705 | |
---|
[354] | 706 | start_timestamp = '' |
---|
| 707 | count_mynodes = 0 |
---|
| 708 | numeric_node = 1 |
---|
| 709 | |
---|
[133] | 710 | for node in mynoderequest.split( '+' ): |
---|
[67] | 711 | |
---|
[354] | 712 | nodepart = node.split( ':' )[0] |
---|
[67] | 713 | |
---|
[133] | 714 | for letter in nodepart: |
---|
[67] | 715 | |
---|
[133] | 716 | if letter not in string.digits: |
---|
| 717 | |
---|
[354] | 718 | numeric_node = 0 |
---|
[133] | 719 | |
---|
| 720 | if not numeric_node: |
---|
[354] | 721 | |
---|
| 722 | count_mynodes = count_mynodes + 1 |
---|
[133] | 723 | else: |
---|
[327] | 724 | try: |
---|
[354] | 725 | count_mynodes = count_mynodes + int( nodepart ) |
---|
| 726 | |
---|
[327] | 727 | except ValueError, detail: |
---|
[354] | 728 | |
---|
[327] | 729 | debug_msg( 10, str( detail ) ) |
---|
| 730 | debug_msg( 10, "Encountered weird node in Resources_List?!" ) |
---|
| 731 | debug_msg( 10, 'nodepart = ' + str( nodepart ) ) |
---|
| 732 | debug_msg( 10, 'job = ' + str( name ) ) |
---|
| 733 | debug_msg( 10, 'attrs = ' + str( attrs ) ) |
---|
[133] | 734 | |
---|
[354] | 735 | nodeslist = str( count_mynodes ) |
---|
[172] | 736 | else: |
---|
[354] | 737 | start_timestamp = '' |
---|
| 738 | nodeslist = '' |
---|
[133] | 739 | |
---|
[354] | 740 | myAttrs = { } |
---|
[26] | 741 | |
---|
[354] | 742 | myAttrs[ 'name' ] = str( name ) |
---|
| 743 | myAttrs[ 'queue' ] = str( queue ) |
---|
| 744 | myAttrs[ 'owner' ] = str( owner ) |
---|
| 745 | myAttrs[ 'requested_time' ] = str( requested_time ) |
---|
| 746 | myAttrs[ 'requested_memory' ] = str( requested_memory ) |
---|
| 747 | myAttrs[ 'ppn' ] = str( ppn ) |
---|
| 748 | myAttrs[ 'status' ] = str( status ) |
---|
| 749 | myAttrs[ 'start_timestamp' ] = str( start_timestamp ) |
---|
| 750 | myAttrs[ 'queued_timestamp' ] = str( queued_timestamp ) |
---|
| 751 | myAttrs[ 'reported' ] = str( int( int( self.cur_time ) + int( self.timeoffset ) ) ) |
---|
| 752 | myAttrs[ 'nodes' ] = nodeslist |
---|
| 753 | myAttrs[ 'domain' ] = string.join( socket.getfqdn().split( '.' )[1:], '.' ) |
---|
| 754 | myAttrs[ 'poll_interval' ] = str( BATCH_POLL_INTERVAL ) |
---|
| 755 | |
---|
[348] | 756 | if self.jobDataChanged( self.jobs, job_id, myAttrs ) and myAttrs['status'] in [ 'R', 'Q' ]: |
---|
[61] | 757 | |
---|
[354] | 758 | self.jobs[ job_id ] = myAttrs |
---|
[26] | 759 | |
---|
[348] | 760 | for id, attrs in self.jobs.items(): |
---|
[76] | 761 | |
---|
| 762 | if id not in jobs_processed: |
---|
| 763 | |
---|
| 764 | # This one isn't there anymore; toedeledoki! |
---|
| 765 | # |
---|
[348] | 766 | del self.jobs[ id ] |
---|
[76] | 767 | |
---|
[348] | 768 | def submitJobData( self ): |
---|
[354] | 769 | |
---|
[65] | 770 | """Submit job info list""" |
---|
| 771 | |
---|
[219] | 772 | self.dp.multicastGmetric( 'MONARCH-HEARTBEAT', str( int( int( self.cur_time ) + int( self.timeoffset ) ) ) ) |
---|
[69] | 773 | |
---|
[61] | 774 | # Now let's spread the knowledge |
---|
| 775 | # |
---|
[348] | 776 | for jobid, jobattrs in self.jobs.items(): |
---|
[61] | 777 | |
---|
[354] | 778 | gmetric_val = self.compileGmetricVal( jobid, jobattrs ) |
---|
| 779 | metric_increment = 0 |
---|
[61] | 780 | |
---|
[354] | 781 | for val in gmetric_val: |
---|
[253] | 782 | |
---|
| 783 | self.dp.multicastGmetric( 'MONARCH-JOB-' + jobid + '-' + str(metric_increment), val ) |
---|
[61] | 784 | |
---|
[354] | 785 | metric_increment = metric_increment + 1 |
---|
| 786 | |
---|
[253] | 787 | def compileGmetricVal( self, jobid, jobattrs ): |
---|
[354] | 788 | |
---|
[253] | 789 | """Create a val string for gmetric of jobinfo""" |
---|
[67] | 790 | |
---|
[354] | 791 | gval_lists = [ ] |
---|
| 792 | mystr = None |
---|
| 793 | val_list = { } |
---|
[67] | 794 | |
---|
[253] | 795 | for val_name, val_value in jobattrs.items(): |
---|
[61] | 796 | |
---|
[253] | 797 | val_list_names_len = len( string.join( val_list.keys() ) ) + len(val_list.keys()) |
---|
| 798 | val_list_vals_len = len( string.join( val_list.values() ) ) + len(val_list.values()) |
---|
[95] | 799 | |
---|
[254] | 800 | if val_name == 'nodes' and jobattrs['status'] == 'R': |
---|
[95] | 801 | |
---|
[253] | 802 | node_str = None |
---|
[95] | 803 | |
---|
[253] | 804 | for node in val_value: |
---|
[65] | 805 | |
---|
[253] | 806 | if node_str: |
---|
[354] | 807 | |
---|
[253] | 808 | node_str = node_str + ';' + node |
---|
| 809 | else: |
---|
| 810 | node_str = node |
---|
[65] | 811 | |
---|
[253] | 812 | if (val_list_names_len + len(val_name) ) + (val_list_vals_len + len(node_str) ) > METRIC_MAX_VAL_LEN: |
---|
[65] | 813 | |
---|
[354] | 814 | val_list[ val_name ] = node_str |
---|
| 815 | |
---|
[253] | 816 | gval_lists.append( val_list ) |
---|
[65] | 817 | |
---|
[354] | 818 | val_list = { } |
---|
| 819 | node_str = None |
---|
| 820 | |
---|
| 821 | val_list[ val_name ] = node_str |
---|
| 822 | |
---|
[253] | 823 | gval_lists.append( val_list ) |
---|
[65] | 824 | |
---|
[354] | 825 | val_list = { } |
---|
| 826 | |
---|
[254] | 827 | elif val_value != '': |
---|
| 828 | |
---|
| 829 | if (val_list_names_len + len(val_name) ) + (val_list_vals_len + len(str(val_value)) ) > METRIC_MAX_VAL_LEN: |
---|
| 830 | |
---|
| 831 | gval_lists.append( val_list ) |
---|
| 832 | |
---|
[354] | 833 | val_list = { } |
---|
[254] | 834 | |
---|
[354] | 835 | val_list[ val_name ] = val_value |
---|
| 836 | |
---|
| 837 | if len( val_list ) > 0: |
---|
| 838 | |
---|
[254] | 839 | gval_lists.append( val_list ) |
---|
| 840 | |
---|
[354] | 841 | str_list = [ ] |
---|
[65] | 842 | |
---|
[253] | 843 | for val_list in gval_lists: |
---|
[65] | 844 | |
---|
[354] | 845 | my_val_str = None |
---|
[65] | 846 | |
---|
[253] | 847 | for val_name, val_value in val_list.items(): |
---|
[65] | 848 | |
---|
[253] | 849 | if my_val_str: |
---|
[65] | 850 | |
---|
[253] | 851 | my_val_str = my_val_str + ' ' + val_name + '=' + val_value |
---|
| 852 | else: |
---|
| 853 | my_val_str = val_name + '=' + val_value |
---|
| 854 | |
---|
| 855 | str_list.append( my_val_str ) |
---|
| 856 | |
---|
| 857 | return str_list |
---|
| 858 | |
---|
[363] | 859 | # |
---|
| 860 | # Gmetric by Nick Galbreath - nickg(a.t)modp(d.o.t)com |
---|
| 861 | # Version 1.0 - 21-April2-2007 |
---|
| 862 | # http://code.google.com/p/embeddedgmetric/ |
---|
| 863 | # |
---|
| 864 | # Modified by: Ramon Bastiaans |
---|
| 865 | # For the Job Monarch Project, see: https://subtrac.sara.nl/oss/jobmonarch/ |
---|
| 866 | # |
---|
| 867 | # added: DEFAULT_TYPE for Gmetric's |
---|
| 868 | # added: checkHostProtocol to determine if target is multicast or not |
---|
| 869 | # changed: allow default for Gmetric constructor |
---|
| 870 | # changed: allow defaults for all send() values except dmax |
---|
| 871 | # |
---|
| 872 | |
---|
[362] | 873 | GMETRIC_DEFAULT_TYPE = 'string' |
---|
| 874 | GMETRIC_DEFAULT_HOST = '127.0.0.1' |
---|
| 875 | GMETRIC_DEFAULT_PORT = '8649' |
---|
| 876 | |
---|
| 877 | class Gmetric: |
---|
| 878 | |
---|
| 879 | global GMETRIC_DEFAULT_HOST, GMETRIC_DEFAULT_PORT |
---|
| 880 | |
---|
| 881 | slope = { 'zero' : 0, 'positive' : 1, 'negative' : 2, 'both' : 3, 'unspecified' : 4 } |
---|
| 882 | type = ( '', 'string', 'uint16', 'int16', 'uint32', 'int32', 'float', 'double', 'timestamp' ) |
---|
| 883 | protocol = ( 'udp', 'multicast' ) |
---|
| 884 | |
---|
| 885 | def __init__( self, host=GMETRIC_DEFAULT_HOST, port=GMETRIC_DEFAULT_PORT ): |
---|
| 886 | |
---|
| 887 | global GMETRIC_DEFAULT_TYPE |
---|
| 888 | |
---|
| 889 | self.prot = self.checkHostProtocol( host ) |
---|
| 890 | self.msg = xdrlib.Packer() |
---|
| 891 | self.socket = socket.socket( socket.AF_INET, socket.SOCK_DGRAM ) |
---|
| 892 | |
---|
| 893 | if self.prot not in self.protocol: |
---|
| 894 | |
---|
| 895 | raise ValueError( "Protocol must be one of: " + str( self.protocol ) ) |
---|
| 896 | |
---|
| 897 | if self.prot == 'multicast': |
---|
| 898 | |
---|
| 899 | self.socket.setsockopt( socket.IPPROTO_IP, socket.IP_MULTICAST_TTL, 20 ) |
---|
| 900 | |
---|
| 901 | self.hostport = ( host, int( port ) ) |
---|
| 902 | self.type = GMETRIC_DEFAULT_TYPE |
---|
| 903 | self.unitstr = '' |
---|
| 904 | self.slopestr = 'both' |
---|
| 905 | self.tmax = 60 |
---|
| 906 | |
---|
| 907 | def checkHostProtocol( self, ip ): |
---|
| 908 | |
---|
| 909 | MULTICAST_ADDRESS_MIN = ( "224", "0", "0", "0" ) |
---|
| 910 | MULTICAST_ADDRESS_MAX = ( "239", "255", "255", "255" ) |
---|
| 911 | |
---|
| 912 | ip_fields = ip.split( '.' ) |
---|
| 913 | |
---|
| 914 | if ip_fields >= MULTICAST_ADDRESS_MIN and ip_fields <= MULTICAST_ADDRESS_MAX: |
---|
| 915 | |
---|
| 916 | return 'multicast' |
---|
| 917 | else: |
---|
| 918 | return 'udp' |
---|
| 919 | |
---|
| 920 | def send( self, name, value, dmax ): |
---|
| 921 | |
---|
| 922 | msg = self.makexdr( name, value, self.type, self.unitstr, self.slopestr, self.tmax, dmax ) |
---|
| 923 | |
---|
| 924 | return self.socket.sendto( msg, self.hostport ) |
---|
| 925 | |
---|
| 926 | def makexdr( self, name, value, typestr, unitstr, slopestr, tmax, dmax ): |
---|
| 927 | |
---|
| 928 | if slopestr not in self.slope: |
---|
| 929 | |
---|
| 930 | raise ValueError( "Slope must be one of: " + str( self.slope.keys() ) ) |
---|
| 931 | |
---|
| 932 | if typestr not in self.type: |
---|
| 933 | |
---|
| 934 | raise ValueError( "Type must be one of: " + str( self.type ) ) |
---|
| 935 | |
---|
| 936 | if len( name ) == 0: |
---|
| 937 | |
---|
| 938 | raise ValueError( "Name must be non-empty" ) |
---|
| 939 | |
---|
| 940 | self.msg.reset() |
---|
| 941 | self.msg.pack_int( 0 ) |
---|
| 942 | self.msg.pack_string( typestr ) |
---|
| 943 | self.msg.pack_string( name ) |
---|
| 944 | self.msg.pack_string( str( value ) ) |
---|
| 945 | self.msg.pack_string( unitstr ) |
---|
| 946 | self.msg.pack_int( self.slope[ slopestr ] ) |
---|
| 947 | self.msg.pack_uint( int( tmax ) ) |
---|
| 948 | self.msg.pack_uint( int( dmax ) ) |
---|
| 949 | |
---|
| 950 | return self.msg.get_buffer() |
---|
| 951 | |
---|
[26] | 952 | def printTime( ): |
---|
[354] | 953 | |
---|
[65] | 954 | """Print current time/date in human readable format for log/debug""" |
---|
[26] | 955 | |
---|
| 956 | return time.strftime("%a, %d %b %Y %H:%M:%S") |
---|
| 957 | |
---|
| 958 | def debug_msg( level, msg ): |
---|
[354] | 959 | |
---|
[65] | 960 | """Print msg if at or above current debug level""" |
---|
[26] | 961 | |
---|
[373] | 962 | if (not DAEMONIZE and DEBUG_LEVEL >= level): |
---|
| 963 | sys.stderr.write( msg + '\n' ) |
---|
[26] | 964 | |
---|
[373] | 965 | if (DAEMONIZE and USE_SYSLOG and SYSLOG_LEVEL >= level): |
---|
| 966 | syslog.syslog( msg ) |
---|
| 967 | |
---|
[307] | 968 | def write_pidfile(): |
---|
| 969 | |
---|
| 970 | # Write pidfile if PIDFILE exists |
---|
| 971 | if PIDFILE: |
---|
| 972 | |
---|
[354] | 973 | pid = os.getpid() |
---|
| 974 | |
---|
| 975 | pidfile = open(PIDFILE, 'w') |
---|
| 976 | |
---|
| 977 | pidfile.write( str( pid ) ) |
---|
[307] | 978 | pidfile.close() |
---|
| 979 | |
---|
[23] | 980 | def main(): |
---|
[354] | 981 | |
---|
[65] | 982 | """Application start""" |
---|
[23] | 983 | |
---|
[352] | 984 | global PBSQuery, PBSError |
---|
[373] | 985 | global SYSLOG_FACILITY, USE_SYSLOG, BATCH_API, DAEMONIZE |
---|
[256] | 986 | |
---|
[212] | 987 | if not processArgs( sys.argv[1:] ): |
---|
[354] | 988 | |
---|
[212] | 989 | sys.exit( 1 ) |
---|
| 990 | |
---|
[256] | 991 | if BATCH_API == 'pbs': |
---|
| 992 | |
---|
| 993 | try: |
---|
[282] | 994 | from PBSQuery import PBSQuery, PBSError |
---|
[256] | 995 | |
---|
| 996 | except ImportError: |
---|
| 997 | |
---|
[373] | 998 | debug_msg( 0, "FATAL ERROR: BATCH_API set to 'pbs' but python module 'pbs_python' is not installed" ) |
---|
[256] | 999 | sys.exit( 1 ) |
---|
| 1000 | |
---|
| 1001 | gather = PbsDataGatherer() |
---|
| 1002 | |
---|
| 1003 | elif BATCH_API == 'sge': |
---|
| 1004 | |
---|
[373] | 1005 | debug_msg( 0, "FATAL ERROR: BATCH_API 'sge' implementation is currently broken, check future releases" ) |
---|
[368] | 1006 | |
---|
| 1007 | sys.exit( 1 ) |
---|
| 1008 | |
---|
[347] | 1009 | gather = SgeDataGatherer() |
---|
[256] | 1010 | |
---|
| 1011 | else: |
---|
[373] | 1012 | debug_msg( 0, "FATAL ERROR: unknown BATCH_API '" + BATCH_API + "' is not supported" ) |
---|
[354] | 1013 | |
---|
[256] | 1014 | sys.exit( 1 ) |
---|
| 1015 | |
---|
[373] | 1016 | if( DAEMONIZE and USE_SYSLOG ): |
---|
| 1017 | |
---|
| 1018 | syslog.openlog( 'jobmond', syslog.LOG_NOWAIT, SYSLOG_FACILITY ) |
---|
| 1019 | |
---|
| 1020 | |
---|
[26] | 1021 | if DAEMONIZE: |
---|
[354] | 1022 | |
---|
[26] | 1023 | gather.daemon() |
---|
| 1024 | else: |
---|
| 1025 | gather.run() |
---|
[23] | 1026 | |
---|
[256] | 1027 | # wh00t? someone started me! :) |
---|
[65] | 1028 | # |
---|
[23] | 1029 | if __name__ == '__main__': |
---|
| 1030 | main() |
---|