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Ticket Resolution Summary Owner Reporter
#51 fixed Swig errors with pbs_python 4.4.0 and Torque 4.2.9 bas cganote@…
Description

Hi,

I've seen a few tickets already on errors with undefined symbols, and I've tried replacing the pbs.py and pbs_wrap.c files as well as the setup.py.in file while compiling, to no avail. I'm still having issues linking these libraries. I'm running CentOS 6.6 and compiling with gcc 4.4.7. Here's what I see:

# Set up a Torque Client
cd torque-4.2.9
./configure --prefix=$(pwd) --mandir=$(pwd)/man  --libdir=$(pwd)/lib64 CC="gcc -m64" --enable-drmaa 
make
make install_clients
export LD_LIBRARY_PATH=$(pwd)/lib64:$LD_LIBRARY_PATH
cd bin
export PATH=$(pwd):$PATH

# Set up pbs_python
cd ..
mkdir pbs_py_again
cd pbs_py_again/
wget ftp://ftp.surfsara.nl/pub/outgoing/pbs_python.tar.gz
tar -xzvf pbs_python.tar.gz 
cd pbs_python-4.4.0/
./configure --prefix=$(pwd) --with-pbsdir=/full/path/to/new/torque-4.2.9
make
emacs Makefile # Because the paths are all screwed up - is this ever going to be fixed?
make install
cd lib/python2.7/site-packages/pbs
export PYTHONPATH=$(pwd)
cd ~
python submit.py #Import pbs

#Traceback (most recent call last):
#  File "submit.py", line 5, in <module>
#    import pbs
#  File "/path/to/pbs/pbs.py", line 25, in <module>
#    _pbs = swig_import_helper()
#  File "/path/to/pbs/pbs.py", line 21, in #swig_import_helper
#    _mod = imp.load_module('_pbs', fp, pathname, description)
#ImportError: /path/to/pbs/_pbs.so: undefined symbol: log_remove_old
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